BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026B04LP1|AL428492
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1380 1755 0.0
>3x_Contig1380
Length = 6718
Score = 1755 bits (882), Expect = 0.0
Identities = 901/908 (99%), Gaps = 2/908 (0%)
Strand = Plus / Minus
Query: 1 aacctcgtaaaagaaaaatttctgatgggactaataaagttaccaaatacgctgacatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6437 aacctcgtaaaagaaaaatttctgatgggactaataaagttaccaaatacgctgacatgt 6378
Query: 61 ttttgctcagtgacgatgatgcggaaagtggttctcaagatgaagatttcggagacgaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6377 ttttgctcagtgacgatgatgcggaaagtggttctcaagatgaagatttcggagacgaga 6318
Query: 121 gtcgcgaaaacgatgtgaagttcaacgtcaatagtgagcggtacggggttgagcacacga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6317 gtcgcgaaaacgatgtgaagttcaacgtcaatagtgagcggtacggggttgagcacacga 6258
Query: 181 atttagtgacaactcagaatcataacttaaatcctatcagcttcaaatctccaagccgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6257 atttagtgacaactcagaatcataacttaaatcctatcagcttcaaatctccaagccgct 6198
Query: 241 tcttggatgtttcaaatgtgaatcattctcctttggcgtataaaactccagagagaaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6197 tcttggatgtttcaaatgtgaatcattctcctttggcgtataaaactccagagagaaata 6138
Query: 301 tcctaaagtcacctttacagcagcccataaaatatcatggagtgagcagcttactcgata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6137 tcctaaagtcacctttacagcagcccataaaatatcatggagtgagcagcttactcgata 6078
Query: 361 atgacatccaagggacgatgaaaaatctatattatatagatgaaaccgacgaggataggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6077 atgacatccaagggacgatgaaaaatctatattatatagatgaaaccgacgaggataggt 6018
Query: 421 ttcttgaaaattctgctgaatcagaagagtactatttggatgawataaatgggataccgg 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 6017 ttcttgaaaattctgctgaatcagaagagtactatttggatgaaataaatgggataccgg 5958
Query: 481 a-gattttgaattttcggacgatgaaaatattatgcggaatctttcacctttaagtaggt 539
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5957 aggattttgaattttcggacgatgaaaatattatgcggaatctttcacctttaagtaggt 5898
Query: 540 tgaatcgaacaaaacttttagcctttagaaggacacatagctattctgaccggccactgg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5897 tgaatcgaacaaaacttttagcctttagaaggacacatagctattctgaccggccactgg 5838
Query: 600 gtgtattgaaagataacactcctcttaattacaagttggaaataaaaaataaaacagtca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5837 gtgtattgaaagataacactcctcttaattacaagttggaaataaaaaataaaacagtca 5778
Query: 660 cattttttgatcataattcaattcataggtcatattctgaacctttcagttcatcattac 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5777 cattttttgatcataattcaattcataggtcatattctgaacctttcagttcatcattac 5718
Query: 720 tccatgattcccgawagtctgaagataattgckaggaccgaatactcgataacaaaactc 779
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 5717 tccatgattcccgaaagtctgaagataattgcgaggaccgaatactcgataacaaaactc 5658
Query: 780 ttgcttcacctgtta-ccccaacagctcattcacgargccttctccaagctttacacaga 838
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5657 ttgcttcacctgttacccccaacagctcattcacgaagccttctccaagctttacacaga 5598
Query: 839 attcttccctcagcccaattcaggaatctacgacctcatcagacgcatctcccaagatat 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5597 attcttccctcagcccaattcaggaatctacgacctcatcagacgcatctcccaagatat 5538
Query: 899 tatwaaca 906
||| ||||
Sbjct: 5537 tataaaca 5530
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7255
Number of Sequences: 1807
Number of extensions: 7255
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)